Bulk RNA-Seq and ATAC-Seq Integration Training

Agenda with start times:

• Data set overview (00:01:14)

• Bulk RNA-Seq analysis pipeline (00:02:40)

• ATAC-Seq alignment (00:39:47)

• Filter alignment (00:42:30)

• Peak detection and chromosome view (00:46:10)

• Filter peaks (00:57:00)

• Peak annotation (01:00:20)

• Compare peak regions across samples (01:07:43)

• Compare peak regions across different samples (01:12:24)

• Motif detection (01:19:05)

• RNA-Seq and ATAC-Seq integration (01:22:25)