> For the complete documentation index, see [llms.txt](https://help.partek.illumina.com/llms.txt). Markdown versions of documentation pages are available by appending `.md` to page URLs; this page is available as [Markdown](https://help.partek.illumina.com/partek-flow/user-manual/task-menu/pre-analysis-tools/generate-group-cell-counts.md).

# Generate group cell counts

If a single cell data node contains cell attribute information, e.g., clustering results, classifications, or imported attributes, a counts-type data node containing the number of cells from each attribute group for each sample can be generated and used for downstream analysis.

To invoke Generate group cell counts:

* Click a single cell count data node with cell-level attribute information
* Click **Pre-analysis** tools in the toolbox
* Click **Generate group cell counts**
* Select the attribute to group the cells from the *Group by* drop-down menu (Figure 1)
* Click **Finish**

<figure><img src="/files/dbww1d5vz1AZmautyWYY" alt="" width="375"><figcaption><p>Figure 1. Select an attribute to group cells</p></figcaption></figure>

A group cell counts node will be generated. The data node contains a matrix of cell counts in each sample for each group. You can view the counts results in the Group cell counts report (Figure 2).

<figure><img src="/files/PE069sTjmJv0FuGiEEyi" alt=""><figcaption><p>Figure 2. Group cell counts for each sample are listed in the task report</p></figcaption></figure>

The Cell counts data node is a counts type data node and downstream analysis tasks, such as normalization, PCA, and ANOVA, can be used to analyze the group cell counts data.

## Additional Assistance

If you need additional assistance, please visit [our support page](http://www.partek.com/support) to submit a help ticket or find phone numbers for regional support.


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